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{ |
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stdenv |
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, python |
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}: |
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|
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python.buildPythonPackage rec { |
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pname = "snakemake"; |
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version = "5.2.2"; |
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|
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propagatedBuildInputs = with python; [ |
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appdirs |
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ConfigArgParse |
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datrie |
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docutils |
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jsonschema |
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pyyaml |
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ratelimiter |
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requests |
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wrapt |
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]; |
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|
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src = python.fetchPypi { |
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inherit pname version; |
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sha256 = "adffe7e24b4a613a9e8bf0a2a320b3cea236d86afb9132bb0bbbc08b8e35a3a3"; |
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}; |
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|
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doCheck = false; # Tests depend on Google Cloud credentials at ${HOME}/gcloud-service-key.json |
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meta = with stdenv.lib; { |
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homepage = http://snakemake.bitbucket.io; |
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license = licenses.mit; |
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description = "Python-based execution environment for make-like workflows"; |
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longDescription = '' |
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Snakemake is a workflow management system that aims to reduce the complexity of |
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creating workflows by providing a fast and comfortable execution environment, |
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together with a clean and readable specification language in Python style. Snakemake |
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workflows are essentially Python scripts extended by declarative code to define |
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rules. Rules describe how to create output files from input files. |
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''; |
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}; |
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} |
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