This is widely used in bioinformatics for assembling genomes & metagenomeswip/yesman
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{ stdenv, fetchFromGitHub, zlib }: |
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stdenv.mkDerivation rec { |
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pname = "megahit"; |
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version = "1.1.4"; |
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|
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src = fetchFromGitHub { |
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owner = "voutcn"; |
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repo = "megahit"; |
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rev = "v${version}"; |
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sha256 = "011k0776w76l03zmy70kfd3y9zjmdnspfbs9fcxmnl3bdwd36kcw"; |
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}; |
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|
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buildInputs = [ zlib ]; |
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installPhase = '' |
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for bin in megahit_sdbg_build megahit megahit_asm_core megahit_toolkit; do |
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install -vD $bin $out/bin/$bin |
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done |
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''; |
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|
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meta = with stdenv.lib; { |
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description = "An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph"; |
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license = licenses.gpl3; |
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homepage = https://github.com/voutcn/megahit; |
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maintainers = with maintainers; [ luispedro ]; |
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platforms = [ "x86_64-linux" ]; |
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}; |
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} |
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