freebayes: add -fcommon workaround

Workaround build failure on -fno-common toolchains like upstream
gcc-10. Otherwise build fails as:

    ld: foomatic_rip-options.o:/build/foomatic-filters-4.0.17/options.c:49: multiple definition of `cupsfilter';
      foomatic_rip-foomaticrip.o:/build/foomatic-filters-4.0.17/foomaticrip.c:158: first defined here
main
Sergei Trofimovich 2 years ago
parent 197681059f
commit deaab56289
  1. 6
      pkgs/applications/science/biology/freebayes/default.nix

@ -15,6 +15,12 @@ stdenv.mkDerivation rec {
buildInputs = [ zlib bzip2 xz ];
# Workaround build failure on -fno-common toolchains like upstream
# gcc-10. Otherwise build fails as:
# ld: foomatic_rip-options.o:/build/foomatic-filters-4.0.17/options.c:49: multiple definition of `cupsfilter';
# foomatic_rip-foomaticrip.o:/build/foomatic-filters-4.0.17/foomaticrip.c:158: first defined here
NIX_CFLAGS_COMPILE = "-fcommon";
installPhase = ''
install -vD bin/freebayes bin/bamleftalign scripts/* -t $out/bin
'';

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