R. Ryantm
5b55f851ac
snakemake: 7.6.1 -> 7.6.2
2 years ago
R. Ryantm
166b1378fe
snakemake: 7.5.0 -> 7.6.1
2 years ago
Fabian Affolter
8b176291d7
snakemake: 6.15.5 -> 7.5.0
2 years ago
Serge K
1248ea16e1
colmap: fix for cuda11.6/gcc11 ( #169623 )
...
* colmap: force nvcc std=c++14 after gcc11 bump
* colmap: optional -> optionals
* colmap: sha256 -> hash
* colmapWithCuda: force CUDA_ENABLED=ON safeguard
* colmapWithCuda: add opengl runpath
2 years ago
R. Ryantm
9919952421
bada-bib: 0.6.1 -> 0.6.2
2 years ago
Dmitry Kalinkin
81f9e28844
root5: fix for glibc
2 years ago
Fabián Heredia Montiel
5275050ab0
fityk: add `-std=c++11` flag for gcc11 and later
2 years ago
R. Ryantm
2a5b81d50f
bada-bib: 0.6.0 -> 0.6.1
2 years ago
ajs124
f9ad6fb744
openmvs: remove after being marked broken for over two years
...
It was marked in commit 796050fedd
by Michael Raskin on 2019-04-14 (commited on 2019-04-14)
2 years ago
R. Ryantm
53dff2f7c8
rink: 0.6.2 -> 0.6.3
2 years ago
Felix Buehler
3bc5196252
treewide: rename name to pname&version
2 years ago
Millian Poquet
9ff032c291
simgrid: 3.30 -> 3.31
...
- addition of the optional eigen dependency, used by a new simulation
model (bmf) that looks very promising to take interference phenomena
into account while remaining coarse-grained.
- enabled the new dependency by default as I think this is interesting
for most users.
2 years ago
Armeen Mahdian
858e03cf1f
golly-beta: remove
...
Golly is more up to date
2 years ago
Naïm Favier
9160044f5f
treewide/makeWrapper: replace `--run cd` with `--chdir`
...
Lay the groundwork for switching to binary wrappers by reducing uses
of `--run` (which is not supported by `makeBinaryWrapper`).
2 years ago
Rasmus Thomsen
69895c6248
bada-bib: 0.5.1 -> 0.6.0
2 years ago
Dmitry Kalinkin
149d68268d
root: fix ROOTConfig.cmake.in patching
2 years ago
R. Ryantm
de0ff65232
cwltool: 3.1.20220221074232 -> 3.1.20220224085855
2 years ago
K900
cb2cfba6f7
treewide: switch all desktop file generators to new API
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Notably:
- remove explicit arguments that match the defaults
- convert everything to the right Nix types
2 years ago
R. Ryantm
d6a24fc108
cwltool: 3.1.20220217222804 -> 3.1.20220221074232
2 years ago
Rasmus Thomsen
87c1d9f92c
bada-bib: 0.4.1 -> 0.5.1
2 years ago
R. Ryantm
c35aa0a0f3
cwltool: 3.1.20220217190813 -> 3.1.20220217222804
2 years ago
Millian Poquet
bc2604732e
simgrid: mark as broken on darwin
2 years ago
Millian Poquet
3f804f68bc
simgrid: 3.28 -> 3.30 + python + clean
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- use latest SimGrid release
- enable the python binding (in new output "python")
- reviews from PR 141040 have been applied
2 years ago
R. Ryantm
b715fcd9d9
cwltool: 3.1.20220210171524 -> 3.1.20220217190813
2 years ago
R. RyanTM
ac1c96ecec
colmap: 3.6 -> 3.7
...
* colmap: 3.6 -> 3.7 (#159198 )
* colmap: license is BSD-3-Clause
Co-authored-by: Renaud <c0bw3b@users.noreply.github.com>
2 years ago
Daniel Wheeler
4befe7a89f
snakemake: 6.10.0 -> 6.15.5 ( #159026 )
...
Fetch from GitHub rather than PyPI so tests are included.
2 years ago
Zhong Jianxin
e8f3914985
treewide: Replace transfig with fig2dev
...
Reasons:
- transfig never get upstream update since it was added to nixpkgs 2006,
according to [fig2dev Debian changelog][1], upstream maintainership
was taken over at 2016, and renamed to fig2dev.
- [Debian][2], [ArchLinux][3], [HomeBrew][4] all use fig2dev to replace
transfig.
- transfig builds [failed][5] on aarch64-darwin, fig2dev builds fine.
- One less package to maintain.
[1]: https://salsa.debian.org/debian/fig2dev/-/blob/debian/1%253.2.6_beta-1/debian/changelog
[2]: https://packages.debian.org/bullseye/transfig
[3]: https://archlinux.org/packages/community/x86_64/fig2dev/
[4]: https://formulae.brew.sh/formula/fig2dev
[5]: https://hydra.nixos.org/build/163404782/nixlog/2
2 years ago
R. Ryantm
2220d35562
bada-bib: 0.3.0 -> 0.4.1
2 years ago
R. Ryantm
24b505484b
cytoscape: 3.9.0 -> 3.9.1
2 years ago
R. Ryantm
1631ffae8d
cwltool: 3.1.20220204090313 -> 3.1.20220210171524
2 years ago
R. RyanTM
1bfc1730e1
cwltool: 3.1.20220202173120 -> 3.1.20220204090313 ( #158272 )
2 years ago
R. Ryantm
af3af2df32
cwltool: 3.1.20220124184855 -> 3.1.20220202173120
2 years ago
Robert Schütz
a13fe11c59
sasview: 4.2.0 -> 5.0.4
2 years ago
Andrew Fontaine
3c0680b783
fahviewer: fix variable substitution for shortcut
...
Because single quotes are used in the sed command, the application
shortcut had the literal $out instead of the package path.
2 years ago
Andrew Fontaine
ba785adb28
fahcontrol: fix variable substitution for shortcut
...
Because single quotes are used in the sed command, the application
shortcut had the literal $out instead of the package path.
2 years ago
Yipeng Sun
54cbee8d97
root: tweak wrapping flags for auxiliary programs, avoid forcing CMAKE_CXX_STANDARD ( #157069 )
2 years ago
Felix Buehler
ed7bf9452c
treewide: remove *.upstream files from updateWalker
2 years ago
R. Ryantm
6b3bf39220
cwltool: 3.1.20220119140128 -> 3.1.20220124184855
2 years ago
R. Ryantm
f888e66ad4
cwltool: 3.1.20211107152837 -> 3.1.20220119140128
2 years ago
ajs124
479ca09609
tulip: 5.2.1 -> 5.6.1
2 years ago
Robert Schütz
d5cceedbd1
python,pythonPackages: make aliases
...
Since aliases are disallowed in nixpkgs, this makes usage of Python 2
which is EOL more explicit.
2 years ago
Dmitry Kalinkin
2b9f8eb0a2
graphia: mark as broken on darwin
2 years ago
Dmitry Kalinkin
69d78f174a
gplates: mark as broken on darwin
2 years ago
Shamrock Lee
cc5ffb3de4
root: Explicit specify -Dtmva=ON
2 years ago
Shamrock Lee
336cc50b1f
root: add openblas and lapack into buildInputs for TMVA
2 years ago
Fabian Affolter
32003c3051
toil: 5.4.0 -> 5.6.0
2 years ago
Fabian Affolter
1a549598b4
cwltool: 3.1.20211104071347 -> 3.1.20211107152837
2 years ago
Fabian Affolter
b9c6bff4f0
nextinspace: 1.0.6 -> 2.0.3
2 years ago
Ben Siraphob
39a0a70d29
treewide: fix homepages with permanent redirect to https
2 years ago
Rasmus Thomsen
83e5da9238
bada-bib: init at 0.3.0
2 years ago