You can not select more than 25 topics
Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
296 lines
8.3 KiB
296 lines
8.3 KiB
{ lib
|
|
, pkgs
|
|
, stdenv
|
|
|
|
# Build-time dependencies:
|
|
, addOpenGLRunpath
|
|
, bazel_5
|
|
, binutils
|
|
, buildBazelPackage
|
|
, buildPythonPackage
|
|
, cython
|
|
, fetchFromGitHub
|
|
, git
|
|
, jsoncpp
|
|
, pybind11
|
|
, setuptools
|
|
, symlinkJoin
|
|
, wheel
|
|
, which
|
|
|
|
# Python dependencies:
|
|
, absl-py
|
|
, flatbuffers
|
|
, numpy
|
|
, scipy
|
|
, six
|
|
|
|
# Runtime dependencies:
|
|
, double-conversion
|
|
, giflib
|
|
, grpc
|
|
, libjpeg_turbo
|
|
, python
|
|
, snappy
|
|
, zlib
|
|
|
|
# CUDA flags:
|
|
, cudaCapabilities ? [ "sm_35" "sm_50" "sm_60" "sm_70" "sm_75" "compute_80" ]
|
|
, cudaSupport ? false
|
|
, cudaPackages ? {}
|
|
|
|
# MKL:
|
|
, mklSupport ? true
|
|
}:
|
|
|
|
let
|
|
|
|
inherit (cudaPackages) cudatoolkit cudnn nccl;
|
|
|
|
pname = "jaxlib";
|
|
version = "0.3.0";
|
|
|
|
meta = with lib; {
|
|
description = "JAX is Autograd and XLA, brought together for high-performance machine learning research.";
|
|
homepage = "https://github.com/google/jax";
|
|
license = licenses.asl20;
|
|
maintainers = with maintainers; [ ndl ];
|
|
platforms = [ "x86_64-linux" "aarch64-darwin" "x86_64-darwin"];
|
|
hydraPlatforms = ["x86_64-linux" ]; # Don't think anybody is checking the darwin builds
|
|
};
|
|
|
|
cudatoolkit_joined = symlinkJoin {
|
|
name = "${cudatoolkit.name}-merged";
|
|
paths = [
|
|
cudatoolkit.lib
|
|
cudatoolkit.out
|
|
] ++ lib.optionals (lib.versionOlder cudatoolkit.version "11") [
|
|
# for some reason some of the required libs are in the targets/x86_64-linux
|
|
# directory; not sure why but this works around it
|
|
"${cudatoolkit}/targets/${stdenv.system}"
|
|
];
|
|
};
|
|
|
|
cudatoolkit_cc_joined = symlinkJoin {
|
|
name = "${cudatoolkit.cc.name}-merged";
|
|
paths = [
|
|
cudatoolkit.cc
|
|
binutils.bintools # for ar, dwp, nm, objcopy, objdump, strip
|
|
];
|
|
};
|
|
|
|
bazel-build = buildBazelPackage {
|
|
name = "bazel-build-${pname}-${version}";
|
|
|
|
bazel = bazel_5;
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "google";
|
|
repo = "jax";
|
|
rev = "${pname}-v${version}";
|
|
sha256 = "0ndpngx5k6lf6jqjck82bbp0gs943z0wh7vs9gwbyk2bw0da7w72";
|
|
};
|
|
|
|
nativeBuildInputs = [
|
|
cython
|
|
pkgs.flatbuffers
|
|
git
|
|
setuptools
|
|
wheel
|
|
which
|
|
];
|
|
|
|
buildInputs = [
|
|
double-conversion
|
|
giflib
|
|
grpc
|
|
jsoncpp
|
|
libjpeg_turbo
|
|
numpy
|
|
pkgs.flatbuffers
|
|
pkgs.protobuf
|
|
pybind11
|
|
scipy
|
|
six
|
|
snappy
|
|
zlib
|
|
] ++ lib.optionals cudaSupport [
|
|
cudatoolkit
|
|
cudnn
|
|
];
|
|
|
|
postPatch = ''
|
|
rm -f .bazelversion
|
|
'';
|
|
|
|
bazelTarget = "//build:build_wheel";
|
|
|
|
removeRulesCC = false;
|
|
|
|
GCC_HOST_COMPILER_PREFIX = lib.optionalString cudaSupport "${cudatoolkit_cc_joined}/bin";
|
|
GCC_HOST_COMPILER_PATH = lib.optionalString cudaSupport "${cudatoolkit_cc_joined}/bin/gcc";
|
|
|
|
preConfigure = ''
|
|
# dummy ldconfig
|
|
mkdir dummy-ldconfig
|
|
echo "#!${stdenv.shell}" > dummy-ldconfig/ldconfig
|
|
chmod +x dummy-ldconfig/ldconfig
|
|
export PATH="$PWD/dummy-ldconfig:$PATH"
|
|
cat <<CFG > ./.jax_configure.bazelrc
|
|
build --strategy=Genrule=standalone
|
|
build --repo_env PYTHON_BIN_PATH="${python}/bin/python"
|
|
build --action_env=PYENV_ROOT
|
|
build --python_path="${python}/bin/python"
|
|
build --distinct_host_configuration=false
|
|
'' + lib.optionalString cudaSupport ''
|
|
build --action_env CUDA_TOOLKIT_PATH="${cudatoolkit_joined}"
|
|
build --action_env CUDNN_INSTALL_PATH="${cudnn}"
|
|
build --action_env TF_CUDA_PATHS="${cudatoolkit_joined},${cudnn},${nccl}"
|
|
build --action_env TF_CUDA_VERSION="${lib.versions.majorMinor cudatoolkit.version}"
|
|
build --action_env TF_CUDNN_VERSION="${lib.versions.major cudnn.version}"
|
|
build:cuda --action_env TF_CUDA_COMPUTE_CAPABILITIES="${lib.concatStringsSep "," cudaCapabilities}"
|
|
'' + ''
|
|
CFG
|
|
'';
|
|
|
|
# Copy-paste from TF derivation.
|
|
# Most of these are not really used in jaxlib compilation but it's simpler to keep it
|
|
# 'as is' so that it's more compatible with TF derivation.
|
|
TF_SYSTEM_LIBS = lib.concatStringsSep "," [
|
|
"absl_py"
|
|
"astor_archive"
|
|
"astunparse_archive"
|
|
"boringssl"
|
|
# Not packaged in nixpkgs
|
|
# "com_github_googleapis_googleapis"
|
|
# "com_github_googlecloudplatform_google_cloud_cpp"
|
|
"com_github_grpc_grpc"
|
|
"com_google_protobuf"
|
|
# Fails with the error: external/org_tensorflow/tensorflow/core/profiler/utils/tf_op_utils.cc:46:49: error: no matching function for call to 're2::RE2::FullMatch(absl::lts_2020_02_25::string_view&, re2::RE2&)'
|
|
# "com_googlesource_code_re2"
|
|
"curl"
|
|
"cython"
|
|
"dill_archive"
|
|
"double_conversion"
|
|
"enum34_archive"
|
|
"flatbuffers"
|
|
"functools32_archive"
|
|
"gast_archive"
|
|
"gif"
|
|
"hwloc"
|
|
"icu"
|
|
"jsoncpp_git"
|
|
"libjpeg_turbo"
|
|
"lmdb"
|
|
"nasm"
|
|
# "nsync" # not packaged in nixpkgs
|
|
"opt_einsum_archive"
|
|
"org_sqlite"
|
|
"pasta"
|
|
"pcre"
|
|
"png"
|
|
"pybind11"
|
|
"six_archive"
|
|
"snappy"
|
|
"tblib_archive"
|
|
"termcolor_archive"
|
|
"typing_extensions_archive"
|
|
"wrapt"
|
|
"zlib"
|
|
];
|
|
|
|
# Make sure Bazel knows about our configuration flags during fetching so that the
|
|
# relevant dependencies can be downloaded.
|
|
bazelFetchFlags = bazel-build.bazelBuildFlags;
|
|
|
|
bazelBuildFlags = [
|
|
"-c opt"
|
|
] ++ lib.optional (stdenv.targetPlatform.isx86_64 && stdenv.targetPlatform.isUnix) [
|
|
"--config=avx_posix"
|
|
] ++ lib.optional cudaSupport [
|
|
"--config=cuda"
|
|
] ++ lib.optional mklSupport [
|
|
"--config=mkl_open_source_only"
|
|
];
|
|
|
|
fetchAttrs = {
|
|
sha256 =
|
|
if cudaSupport then
|
|
"0d2rqwk9n4a6c51m4g21rxymv85kw2sdksni30cdx3pdcdbqgic7"
|
|
else
|
|
"0q540mwmh7grig0qq48ynzqi0gynimxnrq7k97wribqpkx99k39d";
|
|
};
|
|
|
|
buildAttrs = {
|
|
outputs = [ "out" ];
|
|
|
|
# Note: we cannot do most of this patching at `patch` phase as the deps are not available yet.
|
|
# 1) Fix pybind11 include paths.
|
|
# 2) Force static protobuf linkage to prevent crashes on loading multiple extensions
|
|
# in the same python program due to duplicate protobuf DBs.
|
|
# 3) Patch python path in the compiler driver.
|
|
# 4) Patch tensorflow sources to work with later versions of protobuf. See
|
|
# https://github.com/google/jax/issues/9534. Note that this should be
|
|
# removed on the next release after 0.3.0.
|
|
preBuild = ''
|
|
for src in ./jaxlib/*.{cc,h}; do
|
|
sed -i 's@include/pybind11@pybind11@g' $src
|
|
done
|
|
sed -i 's@-lprotobuf@-l:libprotobuf.a@' ../output/external/org_tensorflow/third_party/systemlibs/protobuf.BUILD
|
|
sed -i 's@-lprotoc@-l:libprotoc.a@' ../output/external/org_tensorflow/third_party/systemlibs/protobuf.BUILD
|
|
substituteInPlace ../output/external/org_tensorflow/tensorflow/compiler/xla/python/pprof_profile_builder.cc \
|
|
--replace "status.message()" "std::string{status.message()}"
|
|
'' + lib.optionalString cudaSupport ''
|
|
patchShebangs ../output/external/org_tensorflow/third_party/gpus/crosstool/clang/bin/crosstool_wrapper_driver_is_not_gcc.tpl
|
|
'';
|
|
|
|
installPhase = ''
|
|
./bazel-bin/build/build_wheel --output_path=$out --cpu=${stdenv.targetPlatform.linuxArch}
|
|
'';
|
|
};
|
|
|
|
inherit meta;
|
|
};
|
|
|
|
in
|
|
buildPythonPackage {
|
|
inherit meta pname version;
|
|
format = "wheel";
|
|
|
|
src = "${bazel-build}/jaxlib-${version}-cp${builtins.replaceStrings ["."] [""] python.pythonVersion}-none-manylinux2010_${stdenv.targetPlatform.linuxArch}.whl";
|
|
|
|
# Note that cudatoolkit is necessary since jaxlib looks for "ptxas" in $PATH.
|
|
# See https://github.com/NixOS/nixpkgs/pull/164176#discussion_r828801621 for
|
|
# more info.
|
|
postInstall = lib.optionalString cudaSupport ''
|
|
mkdir -p $out/bin
|
|
ln -s ${cudatoolkit}/bin/ptxas $out/bin/ptxas
|
|
|
|
find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do
|
|
addOpenGLRunpath "$lib"
|
|
patchelf --set-rpath "${cudatoolkit}/lib:${cudatoolkit.lib}/lib:${cudnn}/lib:${nccl}/lib:$(patchelf --print-rpath "$lib")" "$lib"
|
|
done
|
|
'';
|
|
|
|
nativeBuildInputs = lib.optional cudaSupport addOpenGLRunpath;
|
|
|
|
propagatedBuildInputs = [
|
|
absl-py
|
|
double-conversion
|
|
flatbuffers
|
|
giflib
|
|
grpc
|
|
jsoncpp
|
|
libjpeg_turbo
|
|
numpy
|
|
scipy
|
|
six
|
|
snappy
|
|
];
|
|
|
|
pythonImportsCheck = [ "jaxlib" ];
|
|
|
|
# Without it there are complaints about libcudart.so.11.0 not being found
|
|
# because RPATH path entries added above are stripped.
|
|
dontPatchELF = cudaSupport;
|
|
}
|
|
|