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68 lines
1.4 KiB
68 lines
1.4 KiB
{ lib
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, buildPythonPackage
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, pythonOlder
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, fetchFromGitHub
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, pytestCheckHook
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, future
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, numpy
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, pillow
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, fetchpatch
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, scipy
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, scikit-learn
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, scikitimage
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, threadpoolctl
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}:
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buildPythonPackage rec {
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pname = "batchgenerators";
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version = "0.21";
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format = "setuptools";
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disabled = pythonOlder "3.7";
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src = fetchFromGitHub {
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owner = "MIC-DKFZ";
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repo = pname;
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rev = "v${version}";
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hash = "sha256-q8mBWcy+PkJcfiKtq8P2bnTw56FE1suVS0zUgUEmc5k=";
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};
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propagatedBuildInputs = [
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future
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numpy
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pillow
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scipy
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scikit-learn
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scikitimage
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threadpoolctl
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];
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checkInputs = [
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pytestCheckHook
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];
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patches = [
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# Remove deprecated unittest2, https://github.com/MIC-DKFZ/batchgenerators/pull/78
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(fetchpatch {
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name = "remove-unittest2.patch";
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url = "https://github.com/MIC-DKFZ/batchgenerators/commit/87a9437057df8a7550aa3b3eaf840871cc0d5cef.patch";
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sha256 = "sha256-vozBK7g2dLxx9din/R2vU28Mm+LoGAO/BmQlt/ShmEo=";
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})
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];
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postPatch = ''
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substituteInPlace setup.py \
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--replace '"unittest2",' ""
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'';
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pythonImportsCheck = [
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"batchgenerators"
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];
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meta = with lib; {
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description = "2D and 3D image data augmentation for deep learning";
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homepage = "https://github.com/MIC-DKFZ/batchgenerators";
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license = licenses.asl20;
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maintainers = with maintainers; [ bcdarwin ];
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};
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}
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