My personal project and infrastructure archive

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Thomas Gerbet 44c1590f1f bayescan: fix the build ... Moved back to C++14 to avoid the new errors and warnings introduced with C++17.		2 years ago
..
EZminc	…
MACS2	…
N3	…
angsd	angsd: init at 0.937	2 years ago
ants	treewide: avoid use of lib.optional with list in inputs	3 years ago
aragorn	…
bayescan	bayescan: fix the build	2 years ago
bcftools	bcftools: 1.14 -> 1.15	2 years ago
bedops	…
bedtools	…
bftools	…
blast	blast: 2.12.0 -> 2.13.0	2 years ago
bowtie	bowtie: fix build on case insensitive file systems	2 years ago
bowtie2	bowtie2: 2.4.4 -> 2.4.5	2 years ago
bppsuite	…
bwa	bwa: pull upstream fix for -fno-common tollchains	2 years ago
cd-hit	…
clustal-omega	treewide: add meta.mainProgram to many packages	2 years ago
cmtk	cmtk: add `-std=c++11` to fix build on gcc11	2 years ago
conglomerate	…
dcm2niix	dcm2niix: support usage of suggested Cloudflare zlib	2 years ago
deeptools	deeptools: 3.5.0 -> 3.5.1	2 years ago
delly	delly: 0.8.7 -> 0.9.1	3 years ago
diamond	diamond: switch to fetchFromGitHub	2 years ago
ecopcr	pkgs/applications: rename name to pname&version part 2	3 years ago
eggnog-mapper	eggnog-mapper: 1.0.3 -> 2.1.7	2 years ago
emboss	pkgs/applications: rename name to pname&version part 2	3 years ago
est-sfs	…
exonerate	…
fastp	fastp: 0.23.1 -> 0.23.2	3 years ago
febio-studio	febio-studio: init at 1.6.1	2 years ago
flywheel-cli	flywheel-cli: init at 16.2.0	2 years ago
freebayes	…
genmap	genmap: init 1.3.0	3 years ago
hisat2	hisat2: update homepage	2 years ago
hmmer	hmmer: restrict platforms to x86_64	3 years ago
igv	…
inormalize	…
itsx	…
iv	pkgs/applications: rename name to pname&version part 2	3 years ago
kallisto	kallisto: 0.46.2 -> 0.48.0	2 years ago
kent	…
kssd	treewide: move autoconf, automake to nativeBuildInputs	2 years ago
last	last: 1260 -> 1268	2 years ago
macse	…
manta	…
megahit	Static build for megahit	2 years ago
meme-suite	…
messer-slim	messer-slim: 3.7 -> 3.7.1	2 years ago
migrate	…
minc-tools	…
minc-widgets	…
minia	…
minimap2	minimap2: enable aarch64 builds (#161169)	2 years ago
mni_autoreg	…
mosdepth	mosdepth: 0.3.2 -> 0.3.3	2 years ago
mrbayes	…
mrtrix	mrtrix: 3.0.2 -> unstable-2021-11-25	3 years ago
muscle	…
neuron	neuron-mpi: remove appendToName to have a consistent package name for repology	2 years ago
niftyreg	…
niftyseg	niftyseg: switch to fetchFromGitHub	2 years ago
obitools	obitools3: removed useless python restriction	3 years ago
octopus	…
paml	…
picard-tools	treewide: add meta.mainProgram to many packages	2 years ago
platypus	…
plink-ng	…
poretools	python,pythonPackages: make aliases	2 years ago
prodigal	…
quast	treewide: remove nativeBuildInputs that are in stdenv	2 years ago
raxml	raxml-mpi: remove appendToName to have a consistent package name for repology	2 years ago
repseek	repseek: init at 9Sep2014 (#148017)	2 years ago
sambamba	sambamba: 0.8.1 -> 0.8.2 (#155972)	2 years ago
samblaster	…
samtools	Static build for samtools	2 years ago
seaview	seaview: 5.0.4 -> 5.0.5	3 years ago
snpeff	…
somatic-sniper	…
sortmerna	…
spades	SPAdes: 3.15.3 -> 3.15.4	2 years ago
stacks	stacks: 2.59 -> 2.60	2 years ago
star	star: 2.7.9a -> 2.7.10a	2 years ago
strelka	…
subread	subread: init 2.0.3	3 years ago
sumatools	…
svaba	…
tebreak	treewide: remove nativeBuildInputs that are in stdenv	2 years ago
trimal	…
truvari	…
varscan	…
vcftools	…
whisper	…
xenomapper	python3Packages.xenomapper: move to top-level	2 years ago